Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afb2S4R1M3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Gm43474-201ENSMUST00000196415 774 ntBASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb2S4R1M3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.21□□□□□ -0.13
H2afb2S4R1M3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.21□□□□□ -0.14
H2afb2S4R1M3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
H2afb2S4R1M3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms