Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gm18473-201ENSMUST00000220543 868 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gm8598-201ENSMUST00000221184 836 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gm7399-201ENSMUST00000032395 858 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Efs-202ENSMUST00000227037 2540 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hdac6Q9Z2V5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm18054-201ENSMUST00000207539 555 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hdac6Q9Z2V5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac6Q9Z2V5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac6Q9Z2V5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms