Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Gm6182-201ENSMUST00000156439 1208 ntBASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx6Q9R1R0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm12957-201ENSMUST00000117835 377 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm11543-201ENSMUST00000120758 370 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm27680-201ENSMUST00000184192 160 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm27892-201ENSMUST00000185017 106 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm18348-201ENSMUST00000191227 820 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm46436-201ENSMUST00000221851 1294 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gm10154-201ENSMUST00000084445 354 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Olfr582-201ENSMUST00000098212 960 ntBASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx6Q9R1R0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx6Q9R1R0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms