Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prkab1Q9R078 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.21■□□□□ 0.18
Prkab1Q9R078 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prkab1Q9R078 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.2■□□□□ 0.18
Prkab1Q9R078 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.2■□□□□ 0.18
Prkab1Q9R078 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prkab1Q9R078 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.19■□□□□ 0.18
Prkab1Q9R078 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prkab1Q9R078 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.19■□□□□ 0.18
Prkab1Q9R078 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Gm5425-201ENSMUST00000214125 459 ntBASIC16.19■□□□□ 0.18
Prkab1Q9R078 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prkab1Q9R078 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Mir7654-201ENSMUST00000185082 70 ntBASIC16.18■□□□□ 0.18
Prkab1Q9R078 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.18■□□□□ 0.18
Prkab1Q9R078 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prkab1Q9R078 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.17■□□□□ 0.18
Prkab1Q9R078 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.17■□□□□ 0.18
Prkab1Q9R078 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Gm27701-201ENSMUST00000184498 110 ntBASIC16.17■□□□□ 0.18
Prkab1Q9R078 Gm28911-201ENSMUST00000188837 117 ntBASIC16.17■□□□□ 0.18
Prkab1Q9R078 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.17■□□□□ 0.18
Prkab1Q9R078 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Prkab1Q9R078 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms