Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a2Q9JLR1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a2Q9JLR1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a2Q9JLR1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a2Q9JLR1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a2Q9JLR1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a2Q9JLR1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sec61a2Q9JLR1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms