Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.72□□□□□ -0.37
Trem1Q9JKE2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.72□□□□□ -0.37
Trem1Q9JKE2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm15565-201ENSMUST00000118890 427 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm8825-201ENSMUST00000182565 998 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm4518-201ENSMUST00000182638 718 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trem1Q9JKE2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.71□□□□□ -0.38
Trem1Q9JKE2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem1Q9JKE2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms