Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3bQ9ES34 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.85■□□□□ 0.29
Ube3bQ9ES34 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.85■□□□□ 0.29
Ube3bQ9ES34 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3bQ9ES34 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Gm6912-201ENSMUST00000117218 544 ntBASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.84■□□□□ 0.29
Ube3bQ9ES34 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.84■□□□□ 0.29
Ube3bQ9ES34 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ube3bQ9ES34 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ube3bQ9ES34 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ube3bQ9ES34 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm15240-201ENSMUST00000118156 720 ntBASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm8584-201ENSMUST00000171982 758 ntBASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.83■□□□□ 0.28
Ube3bQ9ES34 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms