Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpne8Q9DC53 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpne8Q9DC53 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Rprl2-201ENSMUST00000157150 290 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm27494-201ENSMUST00000184735 189 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm29541-201ENSMUST00000191351 678 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpne8Q9DC53 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Gm12882-201ENSMUST00000121696 517 ntBASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Gm38225-201ENSMUST00000194001 393 ntBASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Gm44335-201ENSMUST00000196879 141 ntBASIC14.8□□□□□ -0.04
Cpne8Q9DC53 Gm44297-201ENSMUST00000198304 141 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms