Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ssbp3Q9D032 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssbp3Q9D032 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Mir8102-201ENSMUST00000184148 139 ntBASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssbp3Q9D032 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssbp3Q9D032 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms