Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim13Q9CYB0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gm14042-201ENSMUST00000120139 833 ntBASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim13Q9CYB0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim13Q9CYB0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim13Q9CYB0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms