Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.72■□□□□ 0.27
Smc3Q9CW03 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Smc3Q9CW03 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smc3Q9CW03 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smc3Q9CW03 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smc3Q9CW03 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Smc3Q9CW03 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Acot6-202ENSMUST00000222921 3622 ntBASIC16.7■□□□□ 0.26
Smc3Q9CW03 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.7■□□□□ 0.26
Smc3Q9CW03 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.7■□□□□ 0.26
Smc3Q9CW03 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.7■□□□□ 0.26
Smc3Q9CW03 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.7■□□□□ 0.26
Smc3Q9CW03 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smc3Q9CW03 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm6973-201ENSMUST00000117080 721 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm15427-201ENSMUST00000117288 531 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm1401-201ENSMUST00000122048 772 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Gm5364-201ENSMUST00000216789 889 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.69■□□□□ 0.26
Smc3Q9CW03 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.69■□□□□ 0.26
Smc3Q9CW03 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smc3Q9CW03 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms