Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb1Q9CQ70 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.65□□□□□ -0.55
H2afb1Q9CQ70 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Gm20553-201ENSMUST00000204205 844 ntBASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb1Q9CQ70 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Gm18206-201ENSMUST00000207027 926 ntBASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Gm18057-201ENSMUST00000208220 503 ntBASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Gm45612-201ENSMUST00000211320 160 ntBASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb1Q9CQ70 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms