Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.2■□□□□ 0.18
Trim11Q99PQ2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim11Q99PQ2 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Mir1895-201ENSMUST00000122615 79 ntBASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim11Q99PQ2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Gm43514-201ENSMUST00000198852 424 ntBASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.18■□□□□ 0.18
Trim11Q99PQ2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim11Q99PQ2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim11Q99PQ2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms