Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.93□□□□□ -0.18
Trim16Q99PP9 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.93□□□□□ -0.18
Trim16Q99PP9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.93□□□□□ -0.18
Trim16Q99PP9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.93□□□□□ -0.18
Trim16Q99PP9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.93□□□□□ -0.18
Trim16Q99PP9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim16Q99PP9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.92□□□□□ -0.18
Trim16Q99PP9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Gm27702-201ENSMUST00000184512 56 ntBASIC13.92□□□□□ -0.18
Trim16Q99PP9 Gm27494-201ENSMUST00000184735 189 ntBASIC13.92□□□□□ -0.18
Trim16Q99PP9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim16Q99PP9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm13464-201ENSMUST00000119418 935 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm15483-201ENSMUST00000120338 456 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm11745-201ENSMUST00000121669 448 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms