Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.14□□□□□ -0.15
Trim33Q99PP7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim33Q99PP7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22065-201ENSMUST00000103753 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22066-201ENSMUST00000103761 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24932-201ENSMUST00000103763 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24115-201ENSMUST00000103799 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22190-201ENSMUST00000103827 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22191-201ENSMUST00000103831 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24721-201ENSMUST00000103849 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm28018-201ENSMUST00000103869 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm26399-201ENSMUST00000103937 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25349-201ENSMUST00000177728 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm23616-201ENSMUST00000177797 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25871-201ENSMUST00000177816 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24752-201ENSMUST00000178240 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24496-201ENSMUST00000178287 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25649-201ENSMUST00000178476 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25548-201ENSMUST00000178681 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm23147-201ENSMUST00000178841 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm26095-201ENSMUST00000179270 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22171-201ENSMUST00000179283 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm23936-201ENSMUST00000179354 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm22619-201ENSMUST00000179516 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25255-201ENSMUST00000179579 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24755-201ENSMUST00000179691 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm26506-201ENSMUST00000179692 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm25086-201ENSMUST00000179931 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm23243-201ENSMUST00000180047 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24659-201ENSMUST00000180212 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm24169-201ENSMUST00000180244 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm23689-201ENSMUST00000180354 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm27359-201ENSMUST00000184153 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm27785-201ENSMUST00000184268 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm27466-201ENSMUST00000184396 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm27703-201ENSMUST00000184836 110 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm5312-201ENSMUST00000203728 547 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim33Q99PP7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim33Q99PP7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms