Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smim3Q99PE5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Gm8097-201ENSMUST00000117903 829 ntBASIC12.11□□□□□ -0.47
Smim3Q99PE5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smim3Q99PE5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.1□□□□□ -0.47
Smim3Q99PE5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Smim3Q99PE5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.09□□□□□ -0.47
Smim3Q99PE5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.09□□□□□ -0.47
Smim3Q99PE5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smim3Q99PE5 Gm15565-201ENSMUST00000118890 427 ntBASIC12.09□□□□□ -0.47
Smim3Q99PE5 Gm8584-201ENSMUST00000171982 758 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms