Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.37■□□□□ 0.53
Rtn4Q99P72 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4Q99P72 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.36■□□□□ 0.53
Rtn4Q99P72 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.36■□□□□ 0.53
Rtn4Q99P72 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.36■□□□□ 0.53
Rtn4Q99P72 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm2810-201ENSMUST00000118681 990 ntBASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm43058-201ENSMUST00000197645 625 ntBASIC18.35■□□□□ 0.53
Rtn4Q99P72 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gm6562-201ENSMUST00000221903 464 ntBASIC18.35■□□□□ 0.53
Rtn4Q99P72 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4Q99P72 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm25287-201ENSMUST00000103846 110 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm22918-201ENSMUST00000103855 110 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.34■□□□□ 0.53
Rtn4Q99P72 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4Q99P72 Gm22588-201ENSMUST00000157510 140 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms