Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.23■□□□□ 0.03
Cntnap4Q99P47 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cntnap4Q99P47 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Gm12859-201ENSMUST00000117834 427 ntBASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Gm23984-201ENSMUST00000157139 203 ntBASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Gm21854-201ENSMUST00000179901 471 ntBASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cntnap4Q99P47 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cntnap4Q99P47 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.21■□□□□ 0.02
Cntnap4Q99P47 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cntnap4Q99P47 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.21■□□□□ 0.02
Cntnap4Q99P47 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm15460-201ENSMUST00000118147 391 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm15957-201ENSMUST00000118893 974 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm12138-201ENSMUST00000122180 951 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm42612-201ENSMUST00000197986 623 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm43170-201ENSMUST00000199827 612 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.2■□□□□ 0.02
Cntnap4Q99P47 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms