Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.8□□□□□ -0.36
Raf1Q99N57 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.8□□□□□ -0.36
Raf1Q99N57 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raf1Q99N57 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm5682-201ENSMUST00000173402 505 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm9726-201ENSMUST00000180321 678 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm7787-201ENSMUST00000216858 688 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.79□□□□□ -0.36
Raf1Q99N57 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Raf1Q99N57 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raf1Q99N57 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.78□□□□□ -0.36
Raf1Q99N57 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Raf1Q99N57 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raf1Q99N57 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms