Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm5279-201ENSMUST00000199575 745 ntBASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col25a1Q99MQ5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm12585-201ENSMUST00000117307 290 ntBASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm45865-201ENSMUST00000211815 945 ntBASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm9368-201ENSMUST00000219348 831 ntBASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Sybu-209ENSMUST00000228639 4113 ntBASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.68□□□□□ -0.06
Col25a1Q99MQ5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Gm45453-201ENSMUST00000211758 853 ntBASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col25a1Q99MQ5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col25a1Q99MQ5 Gm22323-201ENSMUST00000103832 109 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms