Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm13464-201ENSMUST00000119418 935 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf111Q99ML9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rnf111Q99ML9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rnf111Q99ML9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms