Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Nkx6-1Q99MA9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm2495-201ENSMUST00000191160 466 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm7561-201ENSMUST00000211203 886 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx6-1Q99MA9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx6-1Q99MA9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Gm8463-201ENSMUST00000208573 613 ntBASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Gm5425-201ENSMUST00000214125 459 ntBASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx6-1Q99MA9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms