Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.92□□□□□ -0.02
Clp1Q99LI9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.92□□□□□ -0.02
Clp1Q99LI9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.92□□□□□ -0.02
Clp1Q99LI9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.91□□□□□ -0.02
Clp1Q99LI9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.91□□□□□ -0.02
Clp1Q99LI9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.91□□□□□ -0.02
Clp1Q99LI9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clp1Q99LI9 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.91□□□□□ -0.02
Clp1Q99LI9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.9□□□□□ -0.02
Clp1Q99LI9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm23931-201ENSMUST00000103842 109 ntBASIC14.9□□□□□ -0.02
Clp1Q99LI9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm44397-201ENSMUST00000195950 113 ntBASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.9□□□□□ -0.02
Clp1Q99LI9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.9□□□□□ -0.02
Clp1Q99LI9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.9□□□□□ -0.02
Clp1Q99LI9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Sybu-209ENSMUST00000228639 4113 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm12485-201ENSMUST00000119641 291 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm38671-201ENSMUST00000200573 130 ntBASIC14.89□□□□□ -0.03
Clp1Q99LI9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms