Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Gm11803-201ENSMUST00000119966 444 ntBASIC17.44■□□□□ 0.38
RtcbQ99LF4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.44■□□□□ 0.38
RtcbQ99LF4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RtcbQ99LF4 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.43■□□□□ 0.38
RtcbQ99LF4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Gm18473-201ENSMUST00000220543 868 ntBASIC17.43■□□□□ 0.38
RtcbQ99LF4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.43■□□□□ 0.38
RtcbQ99LF4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.43■□□□□ 0.38
RtcbQ99LF4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RtcbQ99LF4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.42■□□□□ 0.38
RtcbQ99LF4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.42■□□□□ 0.38
RtcbQ99LF4 Gm45880-201ENSMUST00000213041 853 ntBASIC17.42■□□□□ 0.38
RtcbQ99LF4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RtcbQ99LF4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RtcbQ99LF4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.41■□□□□ 0.38
RtcbQ99LF4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
RtcbQ99LF4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.41■□□□□ 0.38
RtcbQ99LF4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.41■□□□□ 0.38
RtcbQ99LF4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms