Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm22189-201ENSMUST00000103822 86 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Smc1bQ920F6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc1bQ920F6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.4■□□□□ 0.22
Smc1bQ920F6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Smc1bQ920F6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm42612-201ENSMUST00000197986 623 ntBASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm43170-201ENSMUST00000199827 612 ntBASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gm6266-201ENSMUST00000203844 806 ntBASIC16.4■□□□□ 0.22
Smc1bQ920F6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.4■□□□□ 0.22
Smc1bQ920F6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc1bQ920F6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smc1bQ920F6 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.39■□□□□ 0.21
Smc1bQ920F6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.38■□□□□ 0.21
Smc1bQ920F6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms