Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm18766-201ENSMUST00000189811 808 ntBASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm29541-201ENSMUST00000191351 678 ntBASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm45453-201ENSMUST00000211758 853 ntBASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb1Q91Y08 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm24158-201ENSMUST00000175263 71 ntBASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm27631-201ENSMUST00000184163 466 ntBASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb1Q91Y08 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb1Q91Y08 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm5566-201ENSMUST00000116118 459 ntBASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm43575-201ENSMUST00000196420 516 ntBASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb1Q91Y08 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms