Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Gm44719-201ENSMUST00000206404 149 ntBASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb5Q91XZ5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Pcdhb5Q91XZ5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Mir7085-201ENSMUST00000184353 66 ntBASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Gm27892-201ENSMUST00000185017 106 ntBASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.68■□□□□ 0.26
Pcdhb5Q91XZ5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb5Q91XZ5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms