Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.1■□□□□ 0.01
TraipQ8VIG6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gm6745-201ENSMUST00000199216 526 ntBASIC15.1■□□□□ 0.01
TraipQ8VIG6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.1■□□□□ 0.01
TraipQ8VIG6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TraipQ8VIG6 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.1■□□□□ 0.01
TraipQ8VIG6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Gm23984-201ENSMUST00000157139 203 ntBASIC15.09■□□□□ 0.01
TraipQ8VIG6 Gm24420-201ENSMUST00000176676 59 ntBASIC15.09■□□□□ 0.01
TraipQ8VIG6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.09■□□□□ 0.01
TraipQ8VIG6 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.09■□□□□ 0.01
TraipQ8VIG6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.09■□□□□ 0.01
TraipQ8VIG6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TraipQ8VIG6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TraipQ8VIG6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.08■□□□□ 0
TraipQ8VIG6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TraipQ8VIG6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.08■□□□□ 0
TraipQ8VIG6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.08■□□□□ 0
TraipQ8VIG6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Mir7654-201ENSMUST00000185082 70 ntBASIC15.08■□□□□ 0
TraipQ8VIG6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.08■□□□□ 0
TraipQ8VIG6 Gm9908-201ENSMUST00000211534 448 ntBASIC15.08■□□□□ 0
TraipQ8VIG6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.08■□□□□ 0
TraipQ8VIG6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TraipQ8VIG6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.08■□□□□ 0
TraipQ8VIG6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TraipQ8VIG6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TraipQ8VIG6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms