Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Gm11543-201ENSMUST00000120758 370 ntBASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.71□□□□□ -0.05
Trim60Q8VI40 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim60Q8VI40 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.71□□□□□ -0.06
Trim60Q8VI40 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim60Q8VI40 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim60Q8VI40 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim60Q8VI40 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim60Q8VI40 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Psmb5-202ENSMUST00000227257 622 ntBASIC14.7□□□□□ -0.06
Trim60Q8VI40 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.7□□□□□ -0.06
Trim60Q8VI40 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim60Q8VI40 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.69□□□□□ -0.06
Trim60Q8VI40 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim60Q8VI40 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.68□□□□□ -0.06
Trim60Q8VI40 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Gm18737-201ENSMUST00000173594 937 ntBASIC14.68□□□□□ -0.06
Trim60Q8VI40 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Trim60Q8VI40 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms