Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ndc1Q8VCB1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm14719-201ENSMUST00000121891 340 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm46209-201ENSMUST00000217912 553 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Gm16476-201ENSMUST00000221544 139 ntBASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ndc1Q8VCB1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Gm27838-201ENSMUST00000184829 128 ntBASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Gm45453-201ENSMUST00000211758 853 ntBASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.42□□□□□ -0.26
Ndc1Q8VCB1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ndc1Q8VCB1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms