Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp7Q8R1T1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp7Q8R1T1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Gm13385-201ENSMUST00000121089 220 ntBASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp7Q8R1T1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm11425-201ENSMUST00000119608 498 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm6244-201ENSMUST00000178732 841 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gm9396-201ENSMUST00000076703 567 ntBASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp7Q8R1T1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms