Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Snora73a-201ENSMUST00000082453 205 ntBASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx54Q8K4L0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm44207-201ENSMUST00000204568 1424 ntBASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm17376-201ENSMUST00000166016 84 ntBASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm29396-201ENSMUST00000185659 716 ntBASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm5363-201ENSMUST00000211927 938 ntBASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm10268-201ENSMUST00000085340 555 ntBASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx54Q8K4L0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gm22323-201ENSMUST00000103832 109 ntBASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gm44608-201ENSMUST00000206827 855 ntBASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ddx54Q8K4L0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms