Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf4Q8K4J2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf4Q8K4J2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf4Q8K4J2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ebf4Q8K4J2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm25016-201ENSMUST00000158399 131 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm18489-201ENSMUST00000172565 551 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ebf4Q8K4J2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms