Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm17794-201ENSMUST00000220252 955 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shtn1Q8K2Q9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Snora78-201ENSMUST00000158630 128 ntBASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Gm27486-201ENSMUST00000184923 80 ntBASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Shtn1Q8K2Q9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm23931-201ENSMUST00000103842 109 ntBASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm15240-201ENSMUST00000118156 720 ntBASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms