Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.35□□□□□ -0.11
Clip4Q8CI96 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.35□□□□□ -0.11
Clip4Q8CI96 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clip4Q8CI96 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm11543-201ENSMUST00000120758 370 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm43474-201ENSMUST00000196415 774 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm5312-201ENSMUST00000203728 547 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.34□□□□□ -0.11
Clip4Q8CI96 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clip4Q8CI96 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip4Q8CI96 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clip4Q8CI96 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.33□□□□□ -0.12
Clip4Q8CI96 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Gm43125-201ENSMUST00000201724 730 ntBASIC14.33□□□□□ -0.12
Clip4Q8CI96 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Clip4Q8CI96 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms