Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbm28Q8CGC6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gm11424-201ENSMUST00000121929 829 ntBASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gm9229-201ENSMUST00000222777 126 ntBASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Mir125a-201ENSMUST00000083545 68 ntBASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rbm28Q8CGC6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 AA619741-201ENSMUST00000195095 646 ntBASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
Rbm28Q8CGC6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rbm28Q8CGC6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rbm28Q8CGC6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbm28Q8CGC6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms