Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcpip1Q8CDG3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vcpip1Q8CDG3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vcpip1Q8CDG3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vcpip1Q8CDG3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Gm14701-201ENSMUST00000117156 348 ntBASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Gm5186-201ENSMUST00000218781 920 ntBASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcpip1Q8CDG3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcpip1Q8CDG3 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Gm27920-201ENSMUST00000183953 96 ntBASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcpip1Q8CDG3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Gm44872-201ENSMUST00000207864 420 ntBASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.27■□□□□ 0.04
Vcpip1Q8CDG3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vcpip1Q8CDG3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms