Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps53Q8CCB4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Mir7684-201ENSMUST00000183858 60 ntBASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps53Q8CCB4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps53Q8CCB4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm38294-201ENSMUST00000192831 381 ntBASIC16.54■□□□□ 0.24
Vps53Q8CCB4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm43438-201ENSMUST00000198133 379 ntBASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm6888-201ENSMUST00000221983 706 ntBASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps53Q8CCB4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms