Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smim4Q8C1Q6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smim4Q8C1Q6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm9385-201ENSMUST00000117563 472 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm11543-201ENSMUST00000120758 370 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm8584-201ENSMUST00000171982 758 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Smim4Q8C1Q6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smim4Q8C1Q6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Smim4Q8C1Q6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Smim4Q8C1Q6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.9□□□□□ -0.51
Smim4Q8C1Q6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Smim4Q8C1Q6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms