Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cps1Q8C196 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
Cps1Q8C196 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Cps1Q8C196 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Gm13369-201ENSMUST00000119442 987 ntBASIC18.78■□□□□ 0.6
Cps1Q8C196 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC18.78■□□□□ 0.6
Cps1Q8C196 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.78■□□□□ 0.6
Cps1Q8C196 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cps1Q8C196 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cps1Q8C196 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cps1Q8C196 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cps1Q8C196 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.77■□□□□ 0.6
Cps1Q8C196 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.77■□□□□ 0.6
Cps1Q8C196 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cps1Q8C196 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cps1Q8C196 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cps1Q8C196 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cps1Q8C196 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cps1Q8C196 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cps1Q8C196 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.76■□□□□ 0.59
Cps1Q8C196 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm18056-201ENSMUST00000207670 568 ntBASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm18061-201ENSMUST00000208350 562 ntBASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm18063-201ENSMUST00000208529 568 ntBASIC18.76■□□□□ 0.59
Cps1Q8C196 Gm18052-201ENSMUST00000208750 559 ntBASIC18.76■□□□□ 0.59
Cps1Q8C196 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.76■□□□□ 0.59
Cps1Q8C196 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cps1Q8C196 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cps1Q8C196 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.75■□□□□ 0.59
Cps1Q8C196 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cps1Q8C196 Gm38158-201ENSMUST00000194617 339 ntBASIC18.75■□□□□ 0.59
Cps1Q8C196 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cps1Q8C196 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cps1Q8C196 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.75■□□□□ 0.59
Cps1Q8C196 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cps1Q8C196 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cps1Q8C196 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.74■□□□□ 0.59
Cps1Q8C196 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC18.74■□□□□ 0.59
Cps1Q8C196 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.74■□□□□ 0.59
Cps1Q8C196 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms