Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cpsf4Q8BQZ5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Gm8749-201ENSMUST00000117737 331 ntBASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cpsf4Q8BQZ5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm5312-201ENSMUST00000203728 547 ntBASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cpsf4Q8BQZ5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cpsf4Q8BQZ5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms