Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco3Q8BQM7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco3Q8BQM7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Smco3Q8BQM7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gm27646-201ENSMUST00000183989 110 ntBASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gm6296-201ENSMUST00000222599 943 ntBASIC11.7□□□□□ -0.54
Smco3Q8BQM7 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smco3Q8BQM7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms