Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm4959-201ENSMUST00000197271 1044 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm43758-201ENSMUST00000199500 367 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Rn7sk-201ENSMUST00000083103 331 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm26315-201ENSMUST00000083890 321 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm11618-201ENSMUST00000117946 267 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Gm37922-201ENSMUST00000195596 455 ntBASIC19.87■□□□□ 0.77
Usp54Q8BL06 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usp54Q8BL06 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gm20632-201ENSMUST00000176760 2427 ntBASIC19.86■□□□□ 0.77
Usp54Q8BL06 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gm11400-201ENSMUST00000120853 1214 ntBASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gm5850-201ENSMUST00000192923 1206 ntBASIC19.86■□□□□ 0.77
Usp54Q8BL06 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC19.86■□□□□ 0.77
Usp54Q8BL06 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Usp54Q8BL06 Gm12846-201ENSMUST00000120431 1373 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm14350-201ENSMUST00000116642 640 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm11658-201ENSMUST00000120913 1008 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm2467-201ENSMUST00000182266 1010 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm6981-201ENSMUST00000182467 1008 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gm44064-201ENSMUST00000204964 1087 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.85■□□□□ 0.77
Usp54Q8BL06 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usp54Q8BL06 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.84■□□□□ 0.77
Usp54Q8BL06 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC19.84■□□□□ 0.77
Usp54Q8BL06 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Gm27501-201ENSMUST00000183599 107 ntBASIC19.84■□□□□ 0.77
Usp54Q8BL06 Gm37497-201ENSMUST00000195830 798 ntBASIC19.84■□□□□ 0.77
Usp54Q8BL06 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.84■□□□□ 0.77
Usp54Q8BL06 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usp54Q8BL06 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Gm3961-201ENSMUST00000204425 994 ntBASIC19.83■□□□□ 0.77
Usp54Q8BL06 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.83■□□□□ 0.77
Usp54Q8BL06 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usp54Q8BL06 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms