Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdhr3Q8BL00 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdhr3Q8BL00 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdhr3Q8BL00 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.4□□□□□ -0.42
Cdhr3Q8BL00 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms