Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clrn3Q8BHH8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clrn3Q8BHH8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Gm11745-201ENSMUST00000121669 448 ntBASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Gm37935-201ENSMUST00000192012 982 ntBASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Gm38225-201ENSMUST00000194001 393 ntBASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Clrn3Q8BHH8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Clrn3Q8BHH8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms