Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubp1Q811S7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gm10275-202ENSMUST00000168697 495 ntBASIC14.05□□□□□ -0.16
Ubp1Q811S7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gm19087-201ENSMUST00000191430 946 ntBASIC14.05□□□□□ -0.16
Ubp1Q811S7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.05□□□□□ -0.16
Ubp1Q811S7 Gm10275-201ENSMUST00000092620 635 ntBASIC14.05□□□□□ -0.16
Ubp1Q811S7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ubp1Q811S7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.04□□□□□ -0.16
Ubp1Q811S7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Gm6222-201ENSMUST00000120787 396 ntBASIC14.04□□□□□ -0.16
Ubp1Q811S7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.04□□□□□ -0.16
Ubp1Q811S7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.04□□□□□ -0.16
Ubp1Q811S7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ubp1Q811S7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.03□□□□□ -0.16
Ubp1Q811S7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.03□□□□□ -0.16
Ubp1Q811S7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.03□□□□□ -0.16
Ubp1Q811S7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.03□□□□□ -0.16
Ubp1Q811S7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubp1Q811S7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubp1Q811S7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms