Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40bQ80W14 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.4■□□□□ 0.22
Prpf40bQ80W14 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Gm9797-201ENSMUST00000052902 613 ntBASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf40bQ80W14 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf40bQ80W14 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm4984-201ENSMUST00000115987 360 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm12742-201ENSMUST00000117326 410 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm9002-201ENSMUST00000178437 499 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm16476-201ENSMUST00000221544 139 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf40bQ80W14 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Gm45841-201ENSMUST00000207700 164 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Gm45331-201ENSMUST00000209868 554 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf40bQ80W14 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf40bQ80W14 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms