Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubr5Q80TP3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubr5Q80TP3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm42550-201ENSMUST00000201553 960 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.01□□□□□ -0.49
Ubr5Q80TP3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubr5Q80TP3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12□□□□□ -0.49
Ubr5Q80TP3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ubr5Q80TP3 Gm13886-201ENSMUST00000117876 1183 ntBASIC12□□□□□ -0.49
Ubr5Q80TP3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12□□□□□ -0.49
Ubr5Q80TP3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12□□□□□ -0.49
Ubr5Q80TP3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ubr5Q80TP3 Gm30437-201ENSMUST00000206086 1201 ntBASIC12□□□□□ -0.49
Ubr5Q80TP3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms