Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Prpf38bQ80SY5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Gm4984-201ENSMUST00000115987 360 ntBASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Mir1247-201ENSMUST00000116706 82 ntBASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38bQ80SY5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf38bQ80SY5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Mir1982-201ENSMUST00000157368 74 ntBASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Gm42612-201ENSMUST00000197986 623 ntBASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Gm43170-201ENSMUST00000199827 612 ntBASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Prpf38bQ80SY5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms