Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh8Q7TSK3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Mir125a-201ENSMUST00000083545 68 ntBASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh8Q7TSK3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdh8Q7TSK3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Gm9229-201ENSMUST00000222777 126 ntBASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdh8Q7TSK3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms